WebJan 20, 2024 · GSEA Desktop is 100% Pure Java. Java 8 is required for our pre-built binaries. Builds against other versions of Java may be possible but are unsupported. Oracle Java is recommended as there are known issues when running with OpenJDK. See the LICENSE-3RD-PARTY.txt file for a full list of the MSigDB XML Browser library … WebGSEAPY could be used for RNA-seq, ChIP-seq, Microarry data. Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological states (e.g. phenotypes).
GitHub - ylab-hi/lncGSEA: An R package to identify lncRNA …
WebPTM-Signature Enrichment Analysis (PTM-SEA) is a modified version of ssGSEA to perform site-specific signature analysis by scoring PTMsigDB's bi-directional signature-sets. The input to PTM-SEA is a single site-centric data matrix, m, stored in GCT v1.2 or GCT v1.3 format and PTM signatures database (PTMsigDB). WebGitHub - hxin/gsea: R package for gene set enrichment analysis Skip to content Product Solutions Open Source Pricing Sign in Sign up hxin / gsea Public Notifications Fork 1 Star 6 Code Issues 1 Pull requests Actions Projects Wiki Security Insights master 1 branch 0 tags Code 3 commits Failed to load latest commit information. R inst man vignette lynch ford tires
GseaVis/gsInfoNew.Rd at master · junjunlab/GseaVis · GitHub
Web[GSEA] · GitHub Instantly share code, notes, and snippets. mgandal / RunGSEAinR.R Last active 4 years ago Star 0 Fork 0 Revisions [GSEA] Raw RunGSEAinR.R library ( DOSE ); library ( clusterProfiler) GeneSets = vector ( mode='list') GeneSets$hallmark <- read.gmt ( "~/Dropbox/datasets/GeneSets//MSigDB/h.all.v6.1.symbols.gmt") WebGitHub - chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis chuiqin / irGSEA Fork master 1 branch 1 tag chuiqin fix the bug of plot function c42f07f on Jul 26, 2024 15 commits Failed to load latest commit information. R docs man .Rbuildignore .gitignore DESCRIPTION LICENSE LICENSE.md NAMESPACE … WebMar 20, 2024 · A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries visualization bioinformatics r web-application … lynch ford service mt vernon